Repository Layout

• include/, source/: library headers and implementations.

• apps/: executable entry points.

• tests/, gtests/: regression and unit/integration tests.

• doc/: Doxygen and Sphinx source for the published documentation site.

• scripts/: helper scripts, including scripts/build_doc.sh.

• prms/, benchmarks/: parameter files, meshes, and benchmark assets.

• blood/: auxiliary 1D hemodynamics code and data used by coupled workflows.

• notebooks/, blender/, cgal_utilities/: exploratory and geometry-processing helpers.